Dentate gyrus granule cells are a locus of pathology in Scn8a developmental encephalopathy
Yu W, Hill SF, Zhu L, Demetriou Y, Reger F, Mattis J, Meisler MH. Neurobiology of Disease. 106591. 2024 Jul 3. [PDF] [DOI] [PubMed]

Optogenetic and chemogenetic manipulation of seizure threshold in mice
Kravchenko JA, Goldberg EM, Mattis J. STAR Protocols. 4(1):102019, January 2023 [PDF] [DOI] [PubMed]

Corticohippocampal circuit dysfunction in a mouse model of Dravet syndrome
Mattis J, Somarowthu A, Goff KM, Jiang E, Yom J, Sotuyo NP, McGarry LM, Feng H, Kaneko K, Goldberg EM. eLife. 11:e69293, February 2022 [PDF] [DOI] [PubMed]

Reciprocal Lateral Hypothalamic and Raphe GABAergic Projections Promote Wakefulness
Gazea M, Furdan S, Sere P, Oesch L, Molnár B, Di Giovanni G, Fenno LE, Ramakrishnan C, Mattis J, Deisseroth K, Dymecki SM, Adamantidis AR, LÅ‘rincz ML. J Neurosci.. 41(22):4840-4849, June 2021 [PDF] [DOI] [PubMed]

A Guide to Creating and Testing New INTRSECT Constructs
Fenno LE, Mattis J, Ramakrishnan C, Deisseroth K. Current Protocols in Neuroscience. 80(4):4.39.1-4.39.24, July 2017 [PDF] [DOI] [PubMed]

Clinical Reasoning: A young woman with progressive headache and pancytopenia
Conrad EC, Siegler JE, Mattis J, Schnure N, Messé SR. Neurology. 88(14):e132-e136, April 2017 [PDF] [DOI] [PubMed]

LSPS/Optogenetics to Improve Synaptic Connectivity Mapping: Unmasking the Role of Basket Cell-Mediated Feedforward Inhibition
Brill J, Mattis J, Deisseroth K, Huguenard JR. eNeuro. 3(4):0142-15, August 2016 [PDF] [DOI] [PubMed]

Hilar somatostatin interneuron loss reduces dentate gyrus inhibition in a mouse model of temporal lobe epilepsy
Hofmann G, Balgooyen L, Mattis J, Deisseroth K, Buckmaster PS. Epilepsia. 57(6):977-83, June 2016 [PDF] [DOI] [PubMed]

Circadian Rhythms, Sleep, and Disorders of Aging
Mattis J, Sehgal A.. Trends in Endocrinology & Metabolism. 27(4):192-203, April 2016 [PDF] [DOI] [PubMed]

Optogenetic approaches addressing extracellular modulation of neural excitability
Ferenczi EA, Vierock J, Atsuta-Tsunoda K, Tsunoda SP, Ramakrishnan C, Gorini C, Thompson K, Lee SY, Berndt A, Perry C, Minniberger S, Vogt A, Mattis J, Prakash R, Delp S, Deisseroth K, Hegemann P. Scientific Reports. 6(23947), April 2016 [PDF] [DOI] [PubMed]

Frequency-dependent, cell type-divergent signaling in the hippocamposeptal projection
Mattis J, Brill J, Evans S, Lerner TN, Davidson TJ, Hyun M, Ramakrishnan C, Deisseroth K, Huguenard JR. Journal of Neuroscience. 34(35):11769-80, August 2014 [PDF] [DOI] [PubMed]

Targeting cells with single vectors using multiple-feature Boolean logic
Fenno LE, Mattis J, Ramakrishnan C, Hyun M, Lee SY, He M, Tucciarone J, Selimbeyoglu A, Berndt A, Grosenick L, Zalocusky KA, Bernstein H, Swanson H, Perry C, Diester I, Boyce FM, Bass CE, Neve R, Huang ZJ, Deisseroth K. Nature Methods. 11(7):763-72, July 2014 [PDF] [DOI] [PubMed]

A unique population of ventral tegmental area neurons inhibits the lateral habenula to promote reward
Stamatakis AM, Jennings JH, Ung RL, Blair GA, Weinberg RJ, Neve RL, Boyce F, Mattis J, Ramakrishnan C, Deisseroth K, Stuber GD. Neuron. 80(4):1039-53, November 2013 [PDF] [DOI] [PubMed]

Structural and molecular interrogation of intact biological systems
Chung K, Wallace J, Kim SY, Kalyanasundaram S, Andalman AS, Davidson TJ, Mirzabekov JJ, Zalocusky KA, Mattis J, Denisin AK, Pak S, Bernstein H, Ramakrishnan C, Grosenick L, Gradinaru V, Deisseroth K. Nature. 497(7449):332-7, May 2013 [PDF] [DOI] [PubMed]

Diverging neural pathways assemble a behavioural state from separable features in anxiety
Kim SY, Adhikari A, Lee SY, Marshel JH, Kim CK, Mallory CS, Lo M, Pak S, Mattis J, Lim BK, Malenka RC, Warden MR, Neve R, Tye KM, Deisseroth K. Nature. 496(7444):219-23, April 2013 [PDF] [DOI] [PubMed]

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins
Mattis J, Tye KM, Ferenczi EA, Ramakrishnan C, O'Shea DJ, Prakash R, Gunaydin LA, Hyun M, Fenno LE, Gradinaru V, Yizhar O, Deisseroth K. Nature Methods. 9(2):159-72, December 2011 [PDF] [DOI] [PubMed]

High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels
Berndt A, Schoenenberger P, Mattis J, Tye KM, Deisseroth K, Hegemann P, Oertner TG. Proceedings of the National Academy of Sciences of the United States of America. 108(18):7595-600, May 2011 [PDF] [DOI] [PubMed]

Molecular and cellular approaches for diversifying and extending optogenetics
Gradinaru V, Zhang F, Ramakrishnan C, Mattis J, Prakash R, Diester I, Goshen I, Thompson KR, Deisseroth K. Cell. 141(1):154-165, April 2010 [PDF] [DOI] [PubMed]

Major vault protein is expressed along the nucleus-neurite axis and associates with mRNAs in cortical neurons
Paspalas CD, Perley CC, Venkitaramani DV, Goebel-Goody SM, Zhang Y, Kurup P, Mattis JH, Lombroso PJ. Cerebral Cortex. 19(7):1666-77, July 2009 [PDF] [DOI] [PubMed]

Alternative splicing of Nav1.5: an electrophysiological comparison of ‘neonatal’ and ‘adult’ isoforms and critical involvement of a lysine residue
Onkal R, Mattis JH, Fraser SP, Diss JK, Shao D, Okuse K, Djamgoz MB. Journal of Cellular Physiology. 216(3):716-26, September 2008 [PDF] [DOI] [PubMed]

Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri
Zhang F, Prigge M, Beyrière F, Tsunoda SP, Mattis J, Yizhar O, Hegemann P, Deisseroth K. Nature Neuroscience. 11(6):631-3, June 2008 [PDF] [DOI] [PubMed]

Limits to human movement planning with delayed and unpredictable onset of needed information
Trommershäuser J, Mattis J, Maloney LT, Landy MS. Experimental Brain Research. 175(2):276-84, November 2006 [PDF] [DOI] [PubMed]